John 16:2

2.They will drive you out of the synagogues. This was no light offense to disturb their minds, that they were to be banished like wicked men from the assembly of the godly, or, at least, of those who boasted that they were the people of God, and gloried in the title of The Church; for believers are subject not only to persecutions, but to ignominy and reproaches, as Paul tells us, (1 Corinthians 4:12.) But Christ bids them stand firm against this attack; because, though they be banished from the synagogues, still they remain within the kingdom of God. His statement amounts to this, that we ought not to be dismayed by the perverse judgments of men, but ought to endure boldly the reproach of the cross of Christ, satisfied with this single consideration, that our cause which men unjustly and wickedly condemn, is approved by God.

Hence too we infer, that the ministers of the Gospel not only are ill treated by the avowed enemies of the faith, but sometimes also endure the greatest reproaches from those who appear to belong to the Church, and who are even regarded as its pillars. The scribes and priests, by whom the apostles were condemned, boasted that they were appointed by God to be judges of the Church; and, indeed, the ordinary government of the Church was in their hands, and the office of judging was from God, and not from men. But by their tyranny, they had corrupted the whole of that order which God had appointed. The consequence was, that the power which had been given to them for edification, was nothing else thorn a cruel oppression of the servants of God; and excommunication, which ought to have been a medicine for purifying the Church, was turned to an opposite purpose, for driving away from it the fear of God.

Since the apostles knew this by experience, in their own age, we have no reason to be greatly alarmed at the Pope’s excommunications, with which he thunders against us on account of the testimony of the Gospel; for we ought not to fear that they will do us any more injury than those ancient excommunications which were made against the apostles. Nay more, nothing is more desirable than to be driven out of that assembly from which Christ is banished. Yet let us observe that, though the abuse of excommunication was so gross, still it did not effect the destruction of that discipline which God had appointed in his Church from the beginning; for, though Satan devotes his utmost efforts to corrupt all the ordinances of God, we must not yield to him, so as to take away, on account of corruptions, what God has appointed to be perpetual. Excommunication, therefore, not less than Baptism and the Lord’s Supper, must be brought back, by the correction of abuses, to its pure and lawful use.

But the hour cometh. Christ dwells still more largely on this offense, that the enemies of the Gospel lay claim to so much authority, that they think they are offering sacrifices to God where they slay believers. It is sufficiently hard in itself, that innocent people should be cruelly tormented, but it is far more grievous and distressing that those outrages, which wicked men commit against the children of God, should be reckoned punishments justly due to them on account of their crimes. But we ought to be so fully assured of the protection of a good conscience, as to endure patiently to be oppressed for a time, till Christ appear from heaven, to defend his cause and ours.

It may be thought strange, however, that the enemies of the truth, though they are conscious of their own wickedness, not only impose on men, but even in the presence of God lay claim to praise for their unjust cruelty. I reply, hypocrites, though their conscience accuses them, always resort to flatteries to deceive themselves. They are ambitious, cruel, and proud, but they cover all these vices with the cloak of zeal, that they may indulge in them without restraint. To this is added what may be called a furious drunkenness, after having tasted the blood of martyrs.